基于电子病历的乳腺癌群组与治疗方案可视分析

乳腺癌是当前最常见的恶性肿瘤之一，其电子病历数据可用于挖掘隐含规律，对治疗与预后分析有重要意义。通过与乳腺科医生合作，选择合适的预测模型和可视化方法，搭建了一个基于电子病历的乳腺癌群组和治疗方案可视分析系统。首先，对具有高维属性的病人进行降维和聚类处理，形成病人群组，并采用南丁格尔图、词云和时间轴可视化方法，直观展示病人群组间特征的差异；然后，用支持向量机（support vector machine，SVM）模型预测治疗方案，用平行坐标、矩阵热力图和分类图分别展示属性相关性、训练后的特征权重和预测结果；最后，用真实案例验证了系统在群组分析、治疗方案及病人属性关联分析中的有效性，从而较好地帮助医生选择合适的治疗方案。     

Evaluation of Charged Defect Energy in Two-Dimensional Semiconductors for Nanoelectronics: The WLZ Extrapolation Method

Defects play a central role in controlling the electronic properties of two-dimensional (2D) materials and realizing the industrialization of 2D electronics. However, the evaluation of charged defects in 2D materials within first-principles calculation is very challenging and has triggered a recent development of the WLZ (Wang, Li, Zhang) extrapolation method. This method lays the foundation of the theoretical evaluation of energies of charged defects in 2D materials within the first-principles framework. Herein, the vital role of defects for advancing 2D electronics is discussed, followed by an introduction of the fundamentals of the WLZ extrapolation method. The ionization energies (IEs) obtained by this method for defects in various 2D semiconductors are then reviewed and summarized. Finally, the unique defect physics in 2D dimensions including the dielectric environment effects, defect ionization process, and carrier transport mechanism captured with the WLZ extrapolation method are presented. As an efficient and reasonable evaluation of charged defects in 2D materials for nanoelectronics and other emerging applications, this work can be of benefit to the community.     

The local ultraconvergence of high‐order finite element method for second‐order elliptic problems with constant coefficients over a rectangular partition

In this article, we will discuss the local ultraconvergence of high‐degree finite element method based on a rectangular partition for the second‐degree elliptic problem with constant coefficients in Ω ? ?² , u( y ) = 0 on ?Ω . Based on suitable regularity, ultraconvergence of the displacement of the extrapolated kth (k ≥ 3) degree finite element solution has been obtained by an extrapolation technique. Finally, numerical experiments are applied to demonstrate our theoretical findings.     

Validating additive correction schemes against gradient-based extrapolations

The use of additive correction schemes to obtain structures and vibrational frequencies of increasingly larger molecules is becoming more common. Such approaches, based on the cubic extrapolation formula applied directly to the quantity of interest, have been successfully validated only at the highest levels of computational accuracy: for coupled cluster methods with comparably large basis sets. Here, a systematic validation of geometries and vibrational frequencies is carried out, including more affordable and relevant levels of theory, such as the Møller-Plesset perturbation theory applied with smaller basis sets. Comparisons of such additive schemes against the more rigorous gradient-based extrapolation are presented. The cbs () routine of the open-source quantum-chemistry package Psi4 has been extended for this purpose. The results confirm that geometries and frequencies of covalently bound species obtained with additive correction schemes are in an excellent agreement with the results of gradient-based extrapolations. However, when applied to systems involving noncovalent interactions, the errors due to such schemes are significantly larger. In general, we propose the application of gradient-based extrapolations, as they incur no extra cost compared to additive schemes.     

Focal Point Evaluation of Energies for Tautomers and Isomers for 3-hydroxy-2-butenamide: Evaluation of Competing Internal Hydrogen Bonds of Types -OH…O=, -OH…N, -NH…O=, and CH…X (X=O and N)

The title compound is a small molecule with many structural variations; it can illustrate a variety of internal hydrogen bonds, among other noncovalent interactions. Here we examine structures displaying hydrogen bonding between carbonyl oxygen and hydroxyl H; between carbonyl oxygen and amino H; hydroxyl H and amino N; hydroxyl O and amino H. We also consider H-bonding in its tautomer 2-oxopropanamide. By extrapolation algorithms applied to Hartree-Fock and correlation energies as estimated in HF, MP2, and CCSD calculations using the cc-pVNZ correlation-consistent basis sets (N = 2, 3, and 4) we obtain reliable relative energies of the isomeric forms. Assuming that such energy differences may be attributed to the presence of the various types of hydrogen bonding, we attempt to infer relative strengths of types of H-bonding. The Atoms in Molecules theory of Bader and the Local Vibrational Modes analysis of Cremer and Kraka are applied to this task. Hydrogen bonds are ranked by relative strength as measured by local stretching force constants, with the stronger =O…HO- > NH…O= > -OH…N well separated from a cluster > NH…O= ≈ >NH…OH ≈ CH…O= of comparable and intermediate strength. Weaker but still significant interactions are of type CH…N which is stronger than CH…OH.     

Revisiting the extrapolation of correlation energies to complete basis set limit

The extrapolation scheme of correlation energy is revisited to evaluate the complete basis set limit from double‐zeta (DZ) and triple‐zeta levels of calculations. The DZ level results are adjusted to the standard asymptotic behavior with respect to the cardinal number, observed at the higher levels of basis sets. Two types of adjusting schemes with effective scaling factors, which recover errors in extrapolations with the DZ level basis set, are examined. The first scheme scales the cardinal number for the DZ level energy, while the second scheme scales the prefactor of the extrapolation function. Systematic assessments on the Gaussian‐3X and Gaussian‐2 test sets reveal that these calibration schemes successfully and drastically reduce errors without additional computational efforts. © 2015 Wiley Periodicals, Inc.     

On numerical solution of dynamic problems in the theory of reinforced shells

Dynamic problems for cylindrical shells reinforced with discrete ribs are examined. A numerical algorithm based on Richardson extrapolation is developed. Specific problems are solved, and the results are analyzed __________ Translated from Prikladnaya Mekhanika, Vol. 42, No. 5, pp. 50–56, May 2006.     

广义sine-Gordon方程高精度隐式紧致差分方法

本文研究一类二维非线性的广义sine-Gordon(简称SG)方程的有限差分格式.首先构造三层时间的紧致交替方向隐式差分格式,并用能量分析法证明格式具有二阶时间精度和四阶空间精度.然后应用改进的Richardson外推算法将时间精度提高到四阶.最后,数值算例证实改进后的算法在空间和时间上均达到四阶精度.     

铁路车辆/轨道耦合系统在竖向冲击载荷作用下动态响应的计算机模拟研究

车辆与轨道的动态相互作用,是铁路轮轨接触式运输系统中最基本的问题之一,它直接制约着铁路运营速度的提高和运载重量的增加,也影响着铁路安全运行。本文采用有限元方法,对我国C61型运煤货车,按照车辆/轨道系统的实际几何形状、材料性质和边界条件建立了包括车辆和轨道系统的有限元模型,应用大型非线性动力分析程序LS-DYNA3D来模拟车辆通过轨道错牙接头时的轮/轨动态响应过程。计算结果表明车轮和轨道之间的竖向动态接触力大约是静轮载的2倍,与已有的现场试验结果基本吻合。因此应用有限元方法研究车辆/轨道耦合系统是可行和可靠的。     

数字书法生成方法

将传统书法艺术用数字技术在电子屏幕上呈现，对于书法艺术的传播有重要意义。提出了一种数字书法生成技术，首先，通过在屏幕上采集毛笔书写的轨迹信息，根据不同的速度，分别使用卡尔曼滤波和二次样条曲线插值实现书写轨迹平滑；然后，使用基于真实书写的笔触形态还原方法，呈现具有较高还原度的书法笔迹；最后，为了更好地实现书法中飞白的效果，采用基于规则的方法对书法笔迹进行修饰。